Master index
Index for cobra
Matlab files in this directory:
MOMA
OMNI
addLoopLawConstraints
analyzeRxns
changeGeneAssociation
changeObjective
changeRxnBounds
changeRxnMets
checkCobraModelUnique
checkDuplicateRxn
checkObjective
computeElementalMatrix
computeMW
convertIrrevFluxDistribution
convertModelToEX
convertToIrreversible
convertToReversible
deleteModelGenes
detectDeadEnds
doubleGeneDeletion
doubleRobustnessAnalysis
dynamicFBA
enumerateOptimalSolutions
extractCompModel
extractMetModel
extractSubNetwork
extractSubSysModel
findBlockedReaction
findEpistaticInteractions
findExcRxns
findGeneIDs
findGenesFromRxns
findMetIDs
findMetabolicJunctions
findNeighborRxns
findRxnIDs
findRxnsFromGenes
findRxnsFromMets
findSubSysGen
findTransRxns
fluxVariability
generateDoc
generateRules
geometricFBA
identifyCorrelSets
initCobraToolbox
isSameCobraModel
keepCompartment
linearMOMA
moveRxn
optimizeCbModel
optimizeCbModelNLP
optimizeTwoCbModels
pFBA
parseMetNames
parseRxnFormula
phenotypePhasePlane
printConstraints
printFluxVector
printRxnFormula
printUptakeBound
productionEnvelope
randomObjFBASol
reassignFwBwMatch
reduceModel
removeDeadEnds
robustnessAnalysis
scaleSMatrix
singleGeneDeletion
singleRxnDeletion
testForTypeIIIPathways
testPathway
Subsequent directories:
.svn
design
docs
external
fluxomics
gapFilling
io
maps
rFBA
reconstruction
sampling
solvers
testing
tools
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